The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000096l.64 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000096l.65 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000096l.66 | RAD50 |
PMEG.utg000096l.67 | CYCLINS |
PMEG.utg000096l.68 | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED |
PMEG.utg000096l.69 | OXIDOREDUCTASE GLYR1-RELATED |
PMEG.utg000096l.7 | MYELIN PROTEOLIPID |
PMEG.utg000096l.70 | AF4/FMR2 FAMILY MEMBER |
PMEG.utg000096l.71 | TRANSMEMBRANE PROTEIN HTP-1 RELATED |
PMEG.utg000096l.72 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
PMEG.utg000096l.73 | SORTING NEXIN FAMILY MEMBER |
PMEG.utg000096l.74 | SARCOGLYCANS |
PMEG.utg000096l.75 | PROTON CHANNEL OTOP |
PMEG.utg000096l.76 | HUEL-CATION TRANSPORTER |
PMEG.utg000096l.77 | HISTONE DEACETYLASE HDAC1-RELATED |
PMEG.utg000096l.78 | PROTEIN ZWILCH HOMOLOG |
PMEG.utg000096l.79 | EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN |
PMEG.utg000096l.8 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000096l.80 | AMINO ACID TRANSPORTER |
PMEG.utg000096l.81 | RAI16 PROTEIN-RELATED |
PMEG.utg000096l.82 | SH3 DOMAIN-CONTAINING |
PMEG.utg000096l.83 | G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000096l.84 | TBC1 DOMAIN FAMILY MEMBER 19 |
PMEG.utg000096l.85 | G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000096l.86 | INVERTED FORMIN-2 |
PMEG.utg000096l.87 | BONUS, ISOFORM C-RELATED |
PMEG.utg000096l.88 | INVERTED FORMIN-2 |
PMEG.utg000096l.89 | PROTEIN UNC-50 HOMOLOG |
PMEG.utg000096l.9 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
PMEG.utg000096l.90 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
PMEG.utg000096l.91 | VILLIN |
PMEG.utg000096l.92 | |
PMEG.utg000096l.93 | |
PMEG.utg000096l.94 | ALPHA-AMYLASE FAMILY MEMBER |
PMEG.utg000096l.95 | CALPONIN |
PMEG.utg000096l.96 | WD40 REPEAT DOMAIN 95 |
PMEG.utg000096l.97 | PR DOMAIN ZINC FINGER PROTEIN |
PMEG.utg000096l.98 | APOPTOSIS-INDUCING FACTOR 1 |
PMEG.utg000096l.99 | TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN |
PMEG.utg000097l.1 | |
PMEG.utg000097l.10 | SRCR DOMAIN-CONTAINING PROTEIN |
PMEG.utg000097l.13 | ANKYRIN REPEAT-CONTAINING |
PMEG.utg000097l.14 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
PMEG.utg000097l.15 | ZINC FINGER PROTEIN ZIC AND GLI |
PMEG.utg000097l.16 | |
PMEG.utg000097l.17 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
PMEG.utg000097l.18 | PROTEIN-TYROSINE SULFOTRANSFERASE 2 |
PMEG.utg000097l.19 | ACYL-COA DEHYDROGENASE |
PMEG.utg000097l.2 | |
PMEG.utg000097l.20 | TRANSCRIPTION ELONGATION FACTOR SPT6 |