The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000102l.50 | AMINO ACID TRANSPORTER |
PMEG.utg000102l.51 | AMINO ACID TRANSPORTER |
PMEG.utg000102l.52 | AMINO ACID TRANSPORTER |
PMEG.utg000102l.53 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
PMEG.utg000102l.54 | G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000102l.55 | |
PMEG.utg000102l.56 | BRG-1 ASSOCIATED FACTOR 250 BAF250 |
PMEG.utg000102l.57 | DNA2/NAM7 HELICASE FAMILY MEMBER |
PMEG.utg000102l.58 | PROTEIN C21ORF59 |
PMEG.utg000102l.59 | PROTEIN EVA-1 |
PMEG.utg000102l.6 | RNA CLEAVAGE STIMULATION FACTOR |
PMEG.utg000102l.60 | REPLICATION FACTOR A 1, RFA1 |
PMEG.utg000102l.61 | BONUS, ISOFORM C-RELATED |
PMEG.utg000102l.62 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
PMEG.utg000102l.63 | RIBOSOMAL PROTEIN L19 |
PMEG.utg000102l.64 | SER/THR PROTEIN KINASE-TRB |
PMEG.utg000102l.65 | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER |
PMEG.utg000102l.66 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
PMEG.utg000102l.67 | NO EXINE FORMATION 1 |
PMEG.utg000102l.68 | ZINC FINGER PROTEIN AEBP2 |
PMEG.utg000102l.69 | FORMIN HOMOLOGY 2 FAMILY MEMBER |
PMEG.utg000102l.7 | CRYPTOCHROME |
PMEG.utg000102l.70 | CHARGED MULTIVESICULAR BODY PROTEIN |
PMEG.utg000102l.71 | UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN |
PMEG.utg000102l.72 | PROTEIN ARGININE N-METHYLTRANSFERASE |
PMEG.utg000102l.73 | LYR MOTIF-CONTAINING PROTEIN 2 |
PMEG.utg000102l.74 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
PMEG.utg000102l.75 | PREFOLDIN SUBUNIT 3 |
PMEG.utg000102l.76 | CULLIN |
PMEG.utg000102l.77 | DNA-DIRECTED RNA POLYMERASE SUBUNIT K |
PMEG.utg000102l.78 | SIT4 YEAST -ASSOCIATING PROTEIN-RELATED |
PMEG.utg000102l.79 | UNCHARACTERIZED |
PMEG.utg000102l.8 | |
PMEG.utg000102l.80 | |
PMEG.utg000102l.81 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) |
PMEG.utg000102l.82 | DNA-BINDING PROTEIN-RELATED |
PMEG.utg000102l.83 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
PMEG.utg000102l.84 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
PMEG.utg000102l.85 | ANOCTAMIN |
PMEG.utg000102l.86 | UNCHARACTERIZED |
PMEG.utg000102l.87 | UNCHARACTERIZED |
PMEG.utg000102l.88 | |
PMEG.utg000102l.89 | UNCHARACTERIZED |
PMEG.utg000102l.9 | WD REPEAT AND COILED-COIL-CONTAINING PROTEIN |
PMEG.utg000102l.90 | UNCHARACTERIZED |
PMEG.utg000102l.91 | PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED |
PMEG.utg000102l.92 | PROTEASE M1 ZINC METALLOPROTEASE |
PMEG.utg000102l.93 | HL07962P-RELATED |
PMEG.utg000102l.94 | INHIBITOR OF APOPTOSIS |
PMEG.utg000102l.95 | DNAJ HOMOLOG SUBFAMILY C MEMBER |