The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000106l.60 | AMINO ACID TRANSPORTER |
| PMEG.utg000106l.61 | AMINO ACID TRANSPORTER |
| PMEG.utg000106l.62 | DNA LIGASE |
| PMEG.utg000106l.63 | TYROSINE-PROTEIN KINASE RECEPTOR |
| PMEG.utg000106l.64 | UNCHARACTERIZED |
| PMEG.utg000106l.65 | RHOPHILIN |
| PMEG.utg000106l.66 | AAA DOMAIN-CONTAINING |
| PMEG.utg000106l.67 | |
| PMEG.utg000106l.68 | TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER |
| PMEG.utg000106l.69 | BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE |
| PMEG.utg000106l.7 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| PMEG.utg000106l.70 | UNCHARACTERIZED |
| PMEG.utg000106l.71 | WD REPEAT CONTAINING PROTEIN 3 WDR3 |
| PMEG.utg000106l.72 | DER1-LIKE PROTEIN, DERLIN |
| PMEG.utg000106l.73 | SMALL NUCLEAR RIBONUCLEOPROTEIN SM |
| PMEG.utg000106l.74 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000106l.75 | WD REPEAT-CONTAINING PROTEIN 97 |
| PMEG.utg000106l.76 | TYROSINASE FAMILY MEMBER |
| PMEG.utg000106l.77 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| PMEG.utg000106l.78 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| PMEG.utg000106l.8 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| PMEG.utg000106l.80 | PIRNA BIOGENESIS PROTEIN EXD1 |
| PMEG.utg000106l.81 | EGALITARIAN, ISOFORM B |
| PMEG.utg000106l.82 | ENOYL-COA HYDRATASE-RELATED |
| PMEG.utg000106l.83 | AMINO ACID TRANSPORTER |
| PMEG.utg000106l.9 | TUBULIN POLYGLUTAMYLASE |
| PMEG.utg000107l.10 | PROTEIN ECT2 |
| PMEG.utg000107l.100 | |
| PMEG.utg000107l.101 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| PMEG.utg000107l.102 | DNA-DIRECTED RNA POLYMERASE |
| PMEG.utg000107l.103 | POLY ADP-RIBOSE GLYCOHYDROLASE |
| PMEG.utg000107l.104 | AMMECR1 HOMOLOG |
| PMEG.utg000107l.105 | MIP11318P |
| PMEG.utg000107l.106 | |
| PMEG.utg000107l.107 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1 |
| PMEG.utg000107l.108 | CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED |
| PMEG.utg000107l.109 | GLYCOGENIN SUBFAMILY MEMBER |
| PMEG.utg000107l.11 | OCTANOYLTRANSFERASE |
| PMEG.utg000107l.110 | |
| PMEG.utg000107l.111 | GAMMA TUBULIN COMPLEX PROTEIN |
| PMEG.utg000107l.112 | SULFOTRANSFERASE SULT |
| PMEG.utg000107l.113 | |
| PMEG.utg000107l.114 | |
| PMEG.utg000107l.115 | CYTOKINESIS PROTEIN 3 |
| PMEG.utg000107l.116 | ANKYRIN REPEAT AND MYND DOMAIN PROTEIN 1 |
| PMEG.utg000107l.117 | |
| PMEG.utg000107l.118 | HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 |
| PMEG.utg000107l.119 | SULFOTRANSFERASE SULT |
| PMEG.utg000107l.12 | ADP-RIBOSYL CYCLASE |
| PMEG.utg000107l.120 | SULFOTRANSFERASE SULT |
