The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000111l.11 | HOMEODOX-CONTAINING PROTEIN 1 HMBOX1 |
PMEG.utg000111l.12 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |
PMEG.utg000111l.13 | MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000111l.14 | MICROCEPHALIN |
PMEG.utg000111l.15 | DNAJ HOMOLOG SUBFAMILY C MEMBER 21 |
PMEG.utg000111l.16 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
PMEG.utg000111l.17 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
PMEG.utg000111l.18 | GEO07743P1 |
PMEG.utg000111l.19 | DNA-DIRECTED RNA POLYMERASE |
PMEG.utg000111l.2 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 8 |
PMEG.utg000111l.20 | UNCHARACTERIZED |
PMEG.utg000111l.21 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |
PMEG.utg000111l.22 | G-PROTEIN COUPLED RECEPTOR 143 |
PMEG.utg000111l.23 | TGF-BETA FAMILY |
PMEG.utg000111l.24 | TRANSCRIPTION ELONGATION FACTOR A |
PMEG.utg000111l.25 | |
PMEG.utg000111l.26 | PROTEIN FAM91A1 |
PMEG.utg000111l.27 | CALCIUM BINDING PROTEINS |
PMEG.utg000111l.28 | |
PMEG.utg000111l.29 | WD-REPEAT PROTEIN 18 |
PMEG.utg000111l.3 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
PMEG.utg000111l.30 | NEUROLIGIN |
PMEG.utg000111l.31 | |
PMEG.utg000111l.33 | PATCHED-RELATED |
PMEG.utg000111l.34 | LIM DOMAIN KINASE 1 |
PMEG.utg000111l.36 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
PMEG.utg000111l.37 | |
PMEG.utg000111l.38 | CYTOKINE RECEPTOR |
PMEG.utg000111l.39 | |
PMEG.utg000111l.4 | DNAJ HOMOLOG SUBFAMILY C MEMBER |
PMEG.utg000111l.40 | COILED-COIL DOMAIN-CONTAINING PROTEIN 178 |
PMEG.utg000111l.41 | ADDITIONAL SEX COMBS LIKE PROTEIN ASXL |
PMEG.utg000111l.42 | TRANS-SULFURATION ENZYME FAMILY MEMBER |
PMEG.utg000111l.43 | KINESIN-RELATED PROTEIN 6 |
PMEG.utg000111l.44 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
PMEG.utg000111l.45 | THIOPURINE S-METHYLTRANSFERASE |
PMEG.utg000111l.46 | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN 1 |
PMEG.utg000111l.47 | TRANSCRIPTION INITIATION FACTOR TFIID |
PMEG.utg000111l.48 | GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIAL |
PMEG.utg000111l.49 | PHENYLALANYL-TRNA SYNTHETASE |
PMEG.utg000111l.5 | UNCHARACTERIZED |
PMEG.utg000111l.50 | RGS-GAIP INTERACTING PROTEIN GIPC |
PMEG.utg000111l.51 | TRANSMEMBRANE PROTEIN 214 |
PMEG.utg000111l.52 | DED DOMAIN-CONTAINING PROTEIN |
PMEG.utg000111l.53 | ORGANIC SOLUTE TRANSPORTER-RELATED |
PMEG.utg000111l.54 | SPLICING FACTOR YJU2 |
PMEG.utg000111l.55 | GLYCOGEN DEBRANCHING ENZYME |
PMEG.utg000111l.56 | UNCHARACTERIZED |
PMEG.utg000111l.57 | 40S RIBOSOMAL PROTEIN S12 |
PMEG.utg000111l.58 | SOLUTE CARRIER FAMILY 35 |