The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000108l.2 | NUCLEAR HORMONE RECEPTOR |
PMEG.utg000108l.3 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
PMEG.utg000109l.1 | CADHERIN-87A |
PMEG.utg000109l.10 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED |
PMEG.utg000109l.11 | ATAXIN 2-BINDING PROTEIN 1-RELATED |
PMEG.utg000109l.12 | PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN |
PMEG.utg000109l.13 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22 |
PMEG.utg000109l.14 | EXPORTIN-6 |
PMEG.utg000109l.15 | DNAJ HOMOLOG SUBFAMILY C MEMBER 12 |
PMEG.utg000109l.16 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
PMEG.utg000109l.17 | |
PMEG.utg000109l.18 | UNCHARACTERIZED |
PMEG.utg000109l.19 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
PMEG.utg000109l.2 | CADHERIN-23 |
PMEG.utg000109l.20 | |
PMEG.utg000109l.21 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
PMEG.utg000109l.22 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
PMEG.utg000109l.23 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
PMEG.utg000109l.24 | UBIQUITIN-CONJUGATING ENZYME E2 |
PMEG.utg000109l.25 | UNC-13-4A, ISOFORM B |
PMEG.utg000109l.26 | DNA-DIRECTED RNA POLYMERASE |
PMEG.utg000109l.27 | DNA-DIRECTED RNA POLYMERASE |
PMEG.utg000109l.28 | RNA-BINDING PROTEIN RELATED |
PMEG.utg000109l.29 | SULFOTRANSFERASE SULT |
PMEG.utg000109l.3 | |
PMEG.utg000109l.30 | HISTONE ACETYLTRANSFERASE |
PMEG.utg000109l.31 | ANKYRIN REPEAT DOMAIN 40 |
PMEG.utg000109l.32 | SCAFFOLD ATTACHMENT FACTOR B-RELATED |
PMEG.utg000109l.33 | IKB KINASE |
PMEG.utg000109l.34 | MULTIPLE INOSITOL POLYPHOSPHATE PHOSPHATASE-RELATED |
PMEG.utg000109l.35 | |
PMEG.utg000109l.36 | |
PMEG.utg000109l.37 | UNKEMPT FAMILY MEMBER |
PMEG.utg000109l.38 | TUBERIN |
PMEG.utg000109l.39 | |
PMEG.utg000109l.4 | CADHERIN-87A |
PMEG.utg000109l.40 | SODIUM/CALCIUM EXCHANGER |
PMEG.utg000109l.41 | TMEM26 PROTEIN |
PMEG.utg000109l.42 | UBIQUITIN SPECIFIC PROTEINASE |
PMEG.utg000109l.43 | HEPARAN SULFATE SULFOTRANSFERASE |
PMEG.utg000109l.44 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
PMEG.utg000109l.45 | |
PMEG.utg000109l.46 | |
PMEG.utg000109l.5 | CADHERIN-23 |
PMEG.utg000109l.6 | UNCHARACTERIZED |
PMEG.utg000109l.7 | |
PMEG.utg000109l.8 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000109l.9 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000111l.1 | SNF2/RAD54 FAMILY MEMBER |
PMEG.utg000111l.10 | STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 |