About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21463RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides21464RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides21465ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides21466-
Paelopatides21467SI:CH211-196P9.1-RELATED
Paelopatides21468-
Paelopatides21469CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides21470CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
Paelopatides21471-
Paelopatides21472-
Paelopatides21473FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides21474REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21475-
Paelopatides21476PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Paelopatides21479-
Paelopatides21480UNCHARACTERIZED
Paelopatides21481UNCHARACTERIZED
Paelopatides21482PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides21483-
Paelopatides21484EPM2A-INTERACTING PROTEIN 1
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