About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21329ZGC:195170
Paelopatides21330REVERSE TRANSCRIPTASES
Paelopatides21331RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides21333TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides21335CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Paelopatides21336CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides21337EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
Paelopatides21339-
Paelopatides21340POL PROTEIN
Paelopatides21341PIKACHURIN-LIKE PROTEIN
Paelopatides21342PIKACHURIN-LIKE PROTEIN
Paelopatides21343-
Paelopatides21344ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21345-
Paelopatides21346SI:CH211-196P9.1-RELATED
Paelopatides21347ENDONUCLEASE-RELATED
Paelopatides21348PROTEIN CBG26694
Paelopatides21349T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN
Paelopatides21350-
Paelopatides21353-
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