About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21526ADP-RIBOSYLGLYCOHYDROLASE
Paelopatides21527-
Paelopatides21529-
Paelopatides21530-
Paelopatides21531ENDONUCLEASE-RELATED
Paelopatides21532PORCUPINE
Paelopatides21533-
Paelopatides21534UNCHARACTERIZED
Paelopatides21535HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides21536DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides21537EPH RECEPTOR A5
Paelopatides21538-
Paelopatides21539-
Paelopatides21542ENZYMATIC POLYPROTEIN-RELATED
Paelopatides21543ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides21544TRANSPOSASE, PUTATIVE-RELATED
Paelopatides21545EPM2A-INTERACTING PROTEIN 1
Paelopatides21546-
Paelopatides21547-
Paelopatides21548-
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