About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides22626EPM2A-INTERACTING PROTEIN 1
Paelopatides22627-
Paelopatides22629ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Paelopatides22630ALPHA-AMYLASE
Paelopatides22631L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides22632ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides22633-
Paelopatides22634IP13529P
Paelopatides22635PROTEIN EVA-1
Paelopatides22636-
Paelopatides22637-
Paelopatides22638PROTEIN C21ORF59
Paelopatides22639-
Paelopatides22640REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides22641HMG DOMAIN-CONTAINING PROTEIN 3
Paelopatides22642PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides22643DTDP-4-DEHYDRORHAMNOSE REDUCTASE
Paelopatides22644ENZYMATIC POLYPROTEIN-RELATED
Paelopatides22646GAG-RELATED PROTEIN
Paelopatides22647GAG-RELATED PROTEIN
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