About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides22533B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides22534-
Paelopatides22535REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides22536MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides22537-
Paelopatides22538MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides22539NEPHRIN
Paelopatides22541IONOTROPIC GLUTAMATE RECEPTOR
Paelopatides22542IONOTROPIC GLUTAMATE RECEPTOR
Paelopatides22543-
Paelopatides22544-
Paelopatides22545ANNEXIN
Paelopatides22547GAG-RELATED PROTEIN
Paelopatides22548-
Paelopatides22549TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides22550POL PROTEIN
Paelopatides2255115-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
Paelopatides22552-
Paelopatides22553-
Paelopatides22554ORGANIC ANION TRANSPORTER
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