The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)
Ostrea magellanica Gmelin, 1791
The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.
51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
---|---|---|---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10 | 86,713/6,535 | 38.06 | 43.04 | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000124l.97 | LIMBIN/ELLIS-VAN CREVELD PROTEIN |
PMEG.utg000124l.98 | LIMBIN/ELLIS-VAN CREVELD PROTEIN |
PMEG.utg000124l.99 | SLEI FAMILY PROTEIN |
PMEG.utg000125l.1 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
PMEG.utg000125l.10 | |
PMEG.utg000125l.100 | PEPTIDYL-TRNA HYDROLASE 2 |
PMEG.utg000125l.101 | UNCHARACTERIZED |
PMEG.utg000125l.102 | DOPAMINE BETA HYDROXYLASE RELATED |
PMEG.utg000125l.103 | RIM BINDING PROTEIN-RELATED |
PMEG.utg000125l.104 | RIM BINDING PROTEIN-RELATED |
PMEG.utg000125l.105 | CYTOCHROME P450 508A4-RELATED |
PMEG.utg000125l.106 | |
PMEG.utg000125l.107 | - |
PMEG.utg000125l.108 | - |
PMEG.utg000125l.109 | TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED |
PMEG.utg000125l.11 | BTB/POZ DOMAIN-CONTAINING |
PMEG.utg000125l.110 | PDZ AND LIM DOMAIN PROTEIN ZASP |
PMEG.utg000125l.111 | MITOGEN-ACTIVATED PROTEIN KINASE |
PMEG.utg000125l.112 | PAXIP1-ASSOCIATED GLUTAMATE-RICH PROTEIN 1 |
PMEG.utg000125l.113 | KINESIN-RELATED |
PMEG.utg000125l.114 | COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77 |
PMEG.utg000125l.115 | LEUCINE RICH REPEAT FAMILY PROTEIN |
PMEG.utg000125l.116 | RIBOSOME MATURATION PROTEIN SBDS |
PMEG.utg000125l.117 | CLATHRIN HEAVY CHAIN RELATED |
PMEG.utg000125l.118 | INTRAFLAGELLAR TRANSPORT PROTEIN 20 HOMOLOG |
PMEG.utg000125l.119 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
PMEG.utg000125l.12 | UBIQUITIN-CONJUGATING ENZYME E2 |
PMEG.utg000125l.120 | RAPSYN-RELATED |
PMEG.utg000125l.121 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
PMEG.utg000125l.122 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 |
PMEG.utg000125l.123 | EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN |
PMEG.utg000125l.124 | MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE |
PMEG.utg000125l.125 | MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE |
PMEG.utg000125l.126 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
PMEG.utg000125l.127 | UNC-93 RELATED |
PMEG.utg000125l.128 | SOLUTE CARRIER FAMILY 22 MEMBER |
PMEG.utg000125l.129 | PROTEIN MMS22-LIKE |
PMEG.utg000125l.13 | DER1-LIKE PROTEIN, DERLIN |
PMEG.utg000125l.130 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
PMEG.utg000125l.131 | BLR7054 PROTEIN |
PMEG.utg000125l.132 | BLR7054 PROTEIN |
PMEG.utg000125l.133 | WD40 REPEAT PROTEIN 12, 37 |
PMEG.utg000125l.134 | |
PMEG.utg000125l.135 | PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12 |
PMEG.utg000125l.136 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
PMEG.utg000125l.137 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
PMEG.utg000125l.138 | RETINAL PROTEIN 4 |
PMEG.utg000125l.139 | THO COMPLEX SUBUNIT 6 HOMOLOG |
PMEG.utg000125l.14 | BREAST CANCER METASTASIS-SUPPRESSOR 1 |
PMEG.utg000125l.140 | INWARD RECTIFIER POTASSIUM CHANNEL |