About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.

Classification

Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)

Original Name

Ostrea magellanica Gmelin, 1791

Original description

(Gmelin et al., 1791)

Partial Description

The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.

Distribution/locality

51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10 86,713/6,53538.0643.0428,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000124l.97LIMBIN/ELLIS-VAN CREVELD PROTEIN
PMEG.utg000124l.98LIMBIN/ELLIS-VAN CREVELD PROTEIN
PMEG.utg000124l.99SLEI FAMILY PROTEIN
PMEG.utg000125l.1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
PMEG.utg000125l.10
PMEG.utg000125l.100PEPTIDYL-TRNA HYDROLASE 2
PMEG.utg000125l.101UNCHARACTERIZED
PMEG.utg000125l.102DOPAMINE BETA HYDROXYLASE RELATED
PMEG.utg000125l.103RIM BINDING PROTEIN-RELATED
PMEG.utg000125l.104RIM BINDING PROTEIN-RELATED
PMEG.utg000125l.105CYTOCHROME P450 508A4-RELATED
PMEG.utg000125l.106
PMEG.utg000125l.107-
PMEG.utg000125l.108-
PMEG.utg000125l.109TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED
PMEG.utg000125l.11BTB/POZ DOMAIN-CONTAINING
PMEG.utg000125l.110PDZ AND LIM DOMAIN PROTEIN ZASP
PMEG.utg000125l.111MITOGEN-ACTIVATED PROTEIN KINASE
PMEG.utg000125l.112PAXIP1-ASSOCIATED GLUTAMATE-RICH PROTEIN 1
PMEG.utg000125l.113KINESIN-RELATED
PMEG.utg000125l.114COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77
PMEG.utg000125l.115LEUCINE RICH REPEAT FAMILY PROTEIN
PMEG.utg000125l.116RIBOSOME MATURATION PROTEIN SBDS
PMEG.utg000125l.117CLATHRIN HEAVY CHAIN RELATED
PMEG.utg000125l.118INTRAFLAGELLAR TRANSPORT PROTEIN 20 HOMOLOG
PMEG.utg000125l.119BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER
PMEG.utg000125l.12UBIQUITIN-CONJUGATING ENZYME E2
PMEG.utg000125l.120RAPSYN-RELATED
PMEG.utg000125l.121DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
PMEG.utg000125l.122TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2
PMEG.utg000125l.123EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN
PMEG.utg000125l.124MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
PMEG.utg000125l.125MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
PMEG.utg000125l.126PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47
PMEG.utg000125l.127UNC-93 RELATED
PMEG.utg000125l.128SOLUTE CARRIER FAMILY 22 MEMBER
PMEG.utg000125l.129PROTEIN MMS22-LIKE
PMEG.utg000125l.13DER1-LIKE PROTEIN, DERLIN
PMEG.utg000125l.130SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
PMEG.utg000125l.131BLR7054 PROTEIN
PMEG.utg000125l.132BLR7054 PROTEIN
PMEG.utg000125l.133WD40 REPEAT PROTEIN 12, 37
PMEG.utg000125l.134
PMEG.utg000125l.135PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12
PMEG.utg000125l.136ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER
PMEG.utg000125l.137EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
PMEG.utg000125l.138RETINAL PROTEIN 4
PMEG.utg000125l.139THO COMPLEX SUBUNIT 6 HOMOLOG
PMEG.utg000125l.14BREAST CANCER METASTASIS-SUPPRESSOR 1
PMEG.utg000125l.140INWARD RECTIFIER POTASSIUM CHANNEL
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