About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.

Classification

Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)

Original Name

Ostrea magellanica Gmelin, 1791

Original Description/Redescription

1. Gmelin J F. Caroli Linnaei systema naturae per regna fria naturae. Ed. 13, aucta, reformata, Vermes Testacea[J]. Lipsiae, 1791, 1(6): 3021-3910. (Gmelin et al., 1791)

Partial Description

The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.

Distribution/Locality

51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10 86,713/6,53538.0643.0428,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000125l.187MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10
PMEG.utg000125l.188N-TERMINAL ACETYLTRANSFERASE-RELATED
PMEG.utg000125l.189RING FINGER PROTEIN 25
PMEG.utg000125l.19MAX DIMERIZATION, MAD
PMEG.utg000125l.190PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
PMEG.utg000125l.191AGAP001705-PA
PMEG.utg000125l.192PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
PMEG.utg000125l.193CYTOCHROME P450 FAMILY 4
PMEG.utg000125l.194UNCHARACTERIZED
PMEG.utg000125l.195
PMEG.utg000125l.196SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED
PMEG.utg000125l.197TEKTIN
PMEG.utg000125l.198CDC45-RELATED PROTEIN
PMEG.utg000125l.199UBIQUITIN FUSION DEGRADATON PROTEIN 1
PMEG.utg000125l.2RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
PMEG.utg000125l.20
PMEG.utg000125l.200PHD/F-BOX CONTAINING PROTEIN
PMEG.utg000125l.21PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
PMEG.utg000125l.22POLYKETIDE SYNTHASE-RELATED
PMEG.utg000125l.23SRR1-LIKE PROTEIN
PMEG.utg000125l.24MYOSIN HEAVY CHAIN, NON-MUSCLE
PMEG.utg000125l.25NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING]
PMEG.utg000125l.26ATAXIN 2-RELATED
PMEG.utg000125l.27RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
PMEG.utg000125l.28E3 UBIQUITIN-PROTEIN LIGASE HECTD4-RELATED
PMEG.utg000125l.29UBIQUITIN-PROTEIN LIGASE E3C
PMEG.utg000125l.3SECRETED PROTEIN-RELATED
PMEG.utg000125l.30LIM DOMAIN KINASE 1
PMEG.utg000125l.31SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PMEG.utg000125l.32DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
PMEG.utg000125l.33
PMEG.utg000125l.34DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
PMEG.utg000125l.35DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
PMEG.utg000125l.36DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
PMEG.utg000125l.37LITHOSTATHINE
PMEG.utg000125l.38SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PMEG.utg000125l.39CYTOCHROME P450 FAMILY 3
PMEG.utg000125l.4NITRIC OXIDE SYNTHASE OXYGENASE
PMEG.utg000125l.40
PMEG.utg000125l.41
PMEG.utg000125l.42
PMEG.utg000125l.43COLLAGEN ALPHA
PMEG.utg000125l.44
PMEG.utg000125l.45SOLUTE CARRIER FAMILY 13 MEMBER
PMEG.utg000125l.46PROPERDIN
PMEG.utg000125l.47ES-2 PROTEIN - RELATED
PMEG.utg000125l.48OS10G0105400 PROTEIN
PMEG.utg000125l.49OPSIN
PMEG.utg000125l.52-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2
PMEG.utg000125l.50PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
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