The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)
Ostrea magellanica Gmelin, 1791
1. Gmelin J F. Caroli Linnaei systema naturae per regna fria naturae. Ed. 13, aucta, reformata, Vermes Testacea[J]. Lipsiae, 1791, 1(6): 3021-3910. (Gmelin et al., 1791)
The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.
51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
---|---|---|---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10 | 86,713/6,535 | 38.06 | 43.04 | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000125l.51 | ELECTRON TRANSPORT OXIDOREDUCTASE |
PMEG.utg000125l.52 | CUE DOMAIN CONTAINING PROTEIN 1 |
PMEG.utg000125l.53 | SYNAPTIC VESICLE GLYCOPROTEIN 2 |
PMEG.utg000125l.54 | UBIQUITIN-CONJUGATING ENZYME E2 |
PMEG.utg000125l.55 | BICD FAMILY-LIKE CARGO ADAPTER |
PMEG.utg000125l.56 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 |
PMEG.utg000125l.57 | ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED |
PMEG.utg000125l.58 | RAS-RELATED PROTEIN RAB |
PMEG.utg000125l.59 | PROTEIN ABHD11 |
PMEG.utg000125l.6 | PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN |
PMEG.utg000125l.60 | SAM-DEPENDENT METHYLTRANSFERASE |
PMEG.utg000125l.61 | WD REPEAT-CONTAINING PROTEIN POP1 |
PMEG.utg000125l.62 | TRNASE Z TRZ1 |
PMEG.utg000125l.63 | BREAKPOINT CLUSTER REGION PROTEIN BCR |
PMEG.utg000125l.64 | SYNAPTOSOMAL ASSOCIATED PROTEIN |
PMEG.utg000125l.65 | UNC-13-4A, ISOFORM B |
PMEG.utg000125l.66 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
PMEG.utg000125l.67 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
PMEG.utg000125l.68 | COLLAGEN ALPHA |
PMEG.utg000125l.69 | VOLTAGE-GATED POTASSIUM CHANNEL |
PMEG.utg000125l.7 | TECTONIC FAMILY MEMBER |
PMEG.utg000125l.70 | PYRUVATE DEHYDROGENASE KINASE |
PMEG.utg000125l.71 | |
PMEG.utg000125l.72 | SOLUTE CARRIER FAMILY 13 MEMBER |
PMEG.utg000125l.73 | SOLUTE CARRIER FAMILY 13 MEMBER |
PMEG.utg000125l.74 | PROLINE OXIDASE |
PMEG.utg000125l.75 | CENTROMERE PROTEIN M |
PMEG.utg000125l.76 | GEO07735P1-RELATED-RELATED |
PMEG.utg000125l.77 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
PMEG.utg000125l.78 | OVOCHYMASE-RELATED |
PMEG.utg000125l.79 | ACROSIN-RELATED |
PMEG.utg000125l.8 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
PMEG.utg000125l.80 | COFILIN-RELATED |
PMEG.utg000125l.81 | PESCADILLO - RELATED |
PMEG.utg000125l.82 | DEOXYHYPUSINE SYNTHASE |
PMEG.utg000125l.83 | FATTY ACID BINDING PROTEIN |
PMEG.utg000125l.84 | METABOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000125l.85 | CELL DIVISION CYCLE 16,23,27 |
PMEG.utg000125l.86 | DED DOMAIN-CONTAINING PROTEIN |
PMEG.utg000125l.87 | |
PMEG.utg000125l.88 | SERINE/THREONINE-PROTEIN KINASE |
PMEG.utg000125l.89 | NGG1 INTERACTING FACTOR 3 |
PMEG.utg000125l.9 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 |
PMEG.utg000125l.90 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
PMEG.utg000125l.91 | CHITIN BINDING PERITROPHIN-A |
PMEG.utg000125l.92 | CHITIN BINDING PERITROPHIN-A |
PMEG.utg000125l.93 | PROTEIN YIPPEE-LIKE CG15309-RELATED |
PMEG.utg000125l.94 | CARBONIC ANHYDRASE |
PMEG.utg000125l.95 | MESENCHYME-SPECIFIC CELL SURFACE GLYCOPROTEIN |
PMEG.utg000125l.96 | PHOSPHATIDYLINOSITOL KINASE |