About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.

Classification

Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)

Original Name

Ostrea magellanica Gmelin, 1791

Original Description/Redescription

1. Gmelin J F. Caroli Linnaei systema naturae per regna fria naturae. Ed. 13, aucta, reformata, Vermes Testacea[J]. Lipsiae, 1791, 1(6): 3021-3910. (Gmelin et al., 1791)

Partial Description

The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.

Distribution/Locality

51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10 86,713/6,53538.0643.0428,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000125l.51ELECTRON TRANSPORT OXIDOREDUCTASE
PMEG.utg000125l.52CUE DOMAIN CONTAINING PROTEIN 1
PMEG.utg000125l.53SYNAPTIC VESICLE GLYCOPROTEIN 2
PMEG.utg000125l.54UBIQUITIN-CONJUGATING ENZYME E2
PMEG.utg000125l.55BICD FAMILY-LIKE CARGO ADAPTER
PMEG.utg000125l.56EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3
PMEG.utg000125l.57ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED
PMEG.utg000125l.58RAS-RELATED PROTEIN RAB
PMEG.utg000125l.59PROTEIN ABHD11
PMEG.utg000125l.6PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN
PMEG.utg000125l.60SAM-DEPENDENT METHYLTRANSFERASE
PMEG.utg000125l.61WD REPEAT-CONTAINING PROTEIN POP1
PMEG.utg000125l.62TRNASE Z TRZ1
PMEG.utg000125l.63BREAKPOINT CLUSTER REGION PROTEIN BCR
PMEG.utg000125l.64SYNAPTOSOMAL ASSOCIATED PROTEIN
PMEG.utg000125l.65UNC-13-4A, ISOFORM B
PMEG.utg000125l.66BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA
PMEG.utg000125l.67BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA
PMEG.utg000125l.68COLLAGEN ALPHA
PMEG.utg000125l.69VOLTAGE-GATED POTASSIUM CHANNEL
PMEG.utg000125l.7TECTONIC FAMILY MEMBER
PMEG.utg000125l.70PYRUVATE DEHYDROGENASE KINASE
PMEG.utg000125l.71
PMEG.utg000125l.72SOLUTE CARRIER FAMILY 13 MEMBER
PMEG.utg000125l.73SOLUTE CARRIER FAMILY 13 MEMBER
PMEG.utg000125l.74PROLINE OXIDASE
PMEG.utg000125l.75CENTROMERE PROTEIN M
PMEG.utg000125l.76GEO07735P1-RELATED-RELATED
PMEG.utg000125l.77MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED
PMEG.utg000125l.78OVOCHYMASE-RELATED
PMEG.utg000125l.79ACROSIN-RELATED
PMEG.utg000125l.8UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
PMEG.utg000125l.80COFILIN-RELATED
PMEG.utg000125l.81PESCADILLO - RELATED
PMEG.utg000125l.82DEOXYHYPUSINE SYNTHASE
PMEG.utg000125l.83FATTY ACID BINDING PROTEIN
PMEG.utg000125l.84METABOTROPIC GLUTAMATE RECEPTOR
PMEG.utg000125l.85CELL DIVISION CYCLE 16,23,27
PMEG.utg000125l.86DED DOMAIN-CONTAINING PROTEIN
PMEG.utg000125l.87
PMEG.utg000125l.88SERINE/THREONINE-PROTEIN KINASE
PMEG.utg000125l.89NGG1 INTERACTING FACTOR 3
PMEG.utg000125l.9HISTONE-LYSINE N-METHYLTRANSFERASE SETD1
PMEG.utg000125l.90NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
PMEG.utg000125l.91CHITIN BINDING PERITROPHIN-A
PMEG.utg000125l.92CHITIN BINDING PERITROPHIN-A
PMEG.utg000125l.93PROTEIN YIPPEE-LIKE CG15309-RELATED
PMEG.utg000125l.94CARBONIC ANHYDRASE
PMEG.utg000125l.95MESENCHYME-SPECIFIC CELL SURFACE GLYCOPROTEIN
PMEG.utg000125l.96PHOSPHATIDYLINOSITOL KINASE
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