The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)
Ostrea magellanica Gmelin, 1791
The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.
51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
---|---|---|---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10 | 86,713/6,535 | 38.06 | 43.04 | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000125l.141 | INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 |
PMEG.utg000125l.142 | |
PMEG.utg000125l.143 | GUANYLYL CYCLASE |
PMEG.utg000125l.144 | SERINE / THREONINE RACEMASE FAMILY MEMBER |
PMEG.utg000125l.145 | COILED-COIL DOMAIN-CONTAINING PROTEIN 157 |
PMEG.utg000125l.146 | |
PMEG.utg000125l.147 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000125l.148 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000125l.149 | |
PMEG.utg000125l.15 | SIGNAL PEPTIDE PEPTIDASE |
PMEG.utg000125l.150 | SOLUTE CARRIER FAMILY 22 MEMBER |
PMEG.utg000125l.151 | POTASSIUM CHANNEL, SUBFAMILY K |
PMEG.utg000125l.152 | CERAMIDE GLUCOSYLTRANSFERASE |
PMEG.utg000125l.153 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
PMEG.utg000125l.154 | S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE |
PMEG.utg000125l.155 | DED DOMAIN-CONTAINING PROTEIN |
PMEG.utg000125l.156 | DED DOMAIN-CONTAINING PROTEIN |
PMEG.utg000125l.157 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
PMEG.utg000125l.158 | BRCA1-ASSOCIATED PROTEIN |
PMEG.utg000125l.159 | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA |
PMEG.utg000125l.16 | T-BOX PROTEIN-RELATED |
PMEG.utg000125l.160 | RIBOSOMAL RNA METHYLTRANSFERASE |
PMEG.utg000125l.161 | MOLTING PROTEIN MLT-4 |
PMEG.utg000125l.162 | 14-3-3 PROTEIN |
PMEG.utg000125l.163 | 14-3-3 PROTEIN |
PMEG.utg000125l.164 | PLASMINOGEN-RELATED |
PMEG.utg000125l.165 | CONTACTIN 5 |
PMEG.utg000125l.166 | X-BOX BINDING PROTEIN 1 |
PMEG.utg000125l.167 | AT09986P-RELATED |
PMEG.utg000125l.168 | ANKYRIN REPEAT-CONTAINING |
PMEG.utg000125l.169 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
PMEG.utg000125l.17 | ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 1 |
PMEG.utg000125l.170 | PHOSPHATIDYLSERINE DECARBOXYLASE |
PMEG.utg000125l.171 | CYTOCHROME P450 FAMILY 4 |
PMEG.utg000125l.172 | CYTOCHROME P450 FAMILY 4 |
PMEG.utg000125l.173 | NYD-SP28 PROTEIN |
PMEG.utg000125l.174 | PEROXISOMAL SARCOSINE OXIDASE |
PMEG.utg000125l.175 | PEROXISOMAL SARCOSINE OXIDASE |
PMEG.utg000125l.176 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
PMEG.utg000125l.177 | |
PMEG.utg000125l.178 | UNC-93 RELATED |
PMEG.utg000125l.179 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
PMEG.utg000125l.18 | TRANSMEMBRANE PROTEIN 248-LIKE |
PMEG.utg000125l.180 | BETA TRANSDUCIN-RELATED PROTEIN |
PMEG.utg000125l.181 | NUDIX HYDROLASE |
PMEG.utg000125l.182 | UNC-93 RELATED |
PMEG.utg000125l.183 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
PMEG.utg000125l.184 | DJ-1 PROTEIN |
PMEG.utg000125l.185 | MICROSOMAL GLUTATHIONE S-TRANSFERASE |
PMEG.utg000125l.186 | TRAF-TYPE ZINC FINGER PROTEIN-RELATED |