About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.

Classification

Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)

Original Name

Ostrea magellanica Gmelin, 1791

Original description

(Gmelin et al., 1791)

Partial Description

The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.

Distribution/locality

51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10 86,713/6,53538.0643.0428,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000125l.141INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6
PMEG.utg000125l.142
PMEG.utg000125l.143GUANYLYL CYCLASE
PMEG.utg000125l.144SERINE / THREONINE RACEMASE FAMILY MEMBER
PMEG.utg000125l.145COILED-COIL DOMAIN-CONTAINING PROTEIN 157
PMEG.utg000125l.146
PMEG.utg000125l.147SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PMEG.utg000125l.148SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PMEG.utg000125l.149
PMEG.utg000125l.15SIGNAL PEPTIDE PEPTIDASE
PMEG.utg000125l.150SOLUTE CARRIER FAMILY 22 MEMBER
PMEG.utg000125l.151POTASSIUM CHANNEL, SUBFAMILY K
PMEG.utg000125l.152CERAMIDE GLUCOSYLTRANSFERASE
PMEG.utg000125l.153DYNACTIN 1-RELATED MICROTUBULE-BINDING
PMEG.utg000125l.154S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE
PMEG.utg000125l.155DED DOMAIN-CONTAINING PROTEIN
PMEG.utg000125l.156DED DOMAIN-CONTAINING PROTEIN
PMEG.utg000125l.157CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
PMEG.utg000125l.158BRCA1-ASSOCIATED PROTEIN
PMEG.utg000125l.159TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA
PMEG.utg000125l.16T-BOX PROTEIN-RELATED
PMEG.utg000125l.160RIBOSOMAL RNA METHYLTRANSFERASE
PMEG.utg000125l.161MOLTING PROTEIN MLT-4
PMEG.utg000125l.16214-3-3 PROTEIN
PMEG.utg000125l.16314-3-3 PROTEIN
PMEG.utg000125l.164PLASMINOGEN-RELATED
PMEG.utg000125l.165CONTACTIN 5
PMEG.utg000125l.166X-BOX BINDING PROTEIN 1
PMEG.utg000125l.167AT09986P-RELATED
PMEG.utg000125l.168ANKYRIN REPEAT-CONTAINING
PMEG.utg000125l.169GLYCOLIPID TRANSFER PROTEIN-RELATED
PMEG.utg000125l.17ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 1
PMEG.utg000125l.170PHOSPHATIDYLSERINE DECARBOXYLASE
PMEG.utg000125l.171CYTOCHROME P450 FAMILY 4
PMEG.utg000125l.172CYTOCHROME P450 FAMILY 4
PMEG.utg000125l.173NYD-SP28 PROTEIN
PMEG.utg000125l.174PEROXISOMAL SARCOSINE OXIDASE
PMEG.utg000125l.175PEROXISOMAL SARCOSINE OXIDASE
PMEG.utg000125l.176ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
PMEG.utg000125l.177
PMEG.utg000125l.178UNC-93 RELATED
PMEG.utg000125l.179STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
PMEG.utg000125l.18TRANSMEMBRANE PROTEIN 248-LIKE
PMEG.utg000125l.180BETA TRANSDUCIN-RELATED PROTEIN
PMEG.utg000125l.181NUDIX HYDROLASE
PMEG.utg000125l.182UNC-93 RELATED
PMEG.utg000125l.183THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
PMEG.utg000125l.184DJ-1 PROTEIN
PMEG.utg000125l.185MICROSOMAL GLUTATHIONE S-TRANSFERASE
PMEG.utg000125l.186TRAF-TYPE ZINC FINGER PROTEIN-RELATED
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