About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.

Classification

Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)

Original Name

Ostrea magellanica Gmelin, 1791

Original Description/Redescription

1. Gmelin J F. Caroli Linnaei systema naturae per regna fria naturae. Ed. 13, aucta, reformata, Vermes Testacea[J]. Lipsiae, 1791, 1(6): 3021-3910. (Gmelin et al., 1791)

Partial Description

The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.

Distribution/Locality

51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10 86,713/6,53538.0643.0428,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000125l.97MAJOR VAULT PROTEIN
PMEG.utg000125l.98SOLUTE CARRIER FAMILY 13 MEMBER
PMEG.utg000125l.99GLE-1-RELATED
PMEG.utg000126l.1
PMEG.utg000126l.10UNCHARACTERIZED
PMEG.utg000126l.11SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATED
PMEG.utg000126l.12MITOCHONDRIAL RIBOSOMAL PROTEIN S18B
PMEG.utg000126l.13GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
PMEG.utg000126l.14INTEGRATOR COMPLEX SUBUNIT 5
PMEG.utg000126l.15DEATH DOMAIN-ASSOCIATED PROTEIN 6 DAXX
PMEG.utg000126l.16ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5
PMEG.utg000126l.17HEPARAN SULFATE 2-O-SULFOTRANSFERASE
PMEG.utg000126l.18FI04487P
PMEG.utg000126l.19UNCHARACTERIZED
PMEG.utg000126l.2-
PMEG.utg000126l.20RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
PMEG.utg000126l.21FIBRINOGEN/TENASCIN/ANGIOPOEITIN
PMEG.utg000126l.22RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
PMEG.utg000126l.23FAMILY WITH SEQUENCE SIMILARITY 102
PMEG.utg000126l.24
PMEG.utg000126l.25TFIIH, POLYPEPTIDE 4
PMEG.utg000126l.26VALYL-TRNA SYNTHETASES
PMEG.utg000126l.27
PMEG.utg000126l.28DIMETHYLARGININE DIMETHYLAMINOHYDROLASE
PMEG.utg000126l.29SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52
PMEG.utg000126l.3XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED
PMEG.utg000126l.3030S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18
PMEG.utg000126l.31MEMBRANE PROTEIN CH1 RELATED
PMEG.utg000126l.32
PMEG.utg000126l.33-
PMEG.utg000126l.34GLYCOSIDASE FAMILY 31
PMEG.utg000126l.35GLYCOSIDASE FAMILY 31
PMEG.utg000126l.36ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4
PMEG.utg000126l.37TUDOR DOMAIN CONTAINING PROTEIN
PMEG.utg000126l.38
PMEG.utg000126l.39SERYL-TRNA SYNTHETASE
PMEG.utg000126l.4ADP-RIBOSYLGLYCOHYDROLASE
PMEG.utg000126l.40FIBRINOGEN/TENASCIN/ANGIOPOEITIN
PMEG.utg000126l.41DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE
PMEG.utg000126l.42PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED
PMEG.utg000126l.43NETRIN/LAMININ-RELATED
PMEG.utg000126l.44INTERFERON ALPHA-INDUCIBLE PROTEIN 27
PMEG.utg000126l.45INTERFERON ALPHA-INDUCIBLE PROTEIN 27
PMEG.utg000126l.46VESICLE-ASSOCIATED MEMBRANE PROTEIN 4
PMEG.utg000126l.47TRANSMEMBRANE CHANNEL-RELATED
PMEG.utg000126l.48SI:CH211-175M2.5
PMEG.utg000126l.49DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
PMEG.utg000126l.5-
PMEG.utg000126l.50LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3
PMEG.utg000126l.518-OXOGUANINE DNA GLYCOSYLASE
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