The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)
Ostrea magellanica Gmelin, 1791
1. Gmelin J F. Caroli Linnaei systema naturae per regna fria naturae. Ed. 13, aucta, reformata, Vermes Testacea[J]. Lipsiae, 1791, 1(6): 3021-3910. (Gmelin et al., 1791)
The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.
51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
---|---|---|---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10 | 86,713/6,535 | 38.06 | 43.04 | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000125l.97 | MAJOR VAULT PROTEIN |
PMEG.utg000125l.98 | SOLUTE CARRIER FAMILY 13 MEMBER |
PMEG.utg000125l.99 | GLE-1-RELATED |
PMEG.utg000126l.1 | |
PMEG.utg000126l.10 | UNCHARACTERIZED |
PMEG.utg000126l.11 | SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATED |
PMEG.utg000126l.12 | MITOCHONDRIAL RIBOSOMAL PROTEIN S18B |
PMEG.utg000126l.13 | GALACTOSIDE 2-L-FUCOSYLTRANSFERASE |
PMEG.utg000126l.14 | INTEGRATOR COMPLEX SUBUNIT 5 |
PMEG.utg000126l.15 | DEATH DOMAIN-ASSOCIATED PROTEIN 6 DAXX |
PMEG.utg000126l.16 | ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5 |
PMEG.utg000126l.17 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
PMEG.utg000126l.18 | FI04487P |
PMEG.utg000126l.19 | UNCHARACTERIZED |
PMEG.utg000126l.2 | - |
PMEG.utg000126l.20 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
PMEG.utg000126l.21 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
PMEG.utg000126l.22 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
PMEG.utg000126l.23 | FAMILY WITH SEQUENCE SIMILARITY 102 |
PMEG.utg000126l.24 | |
PMEG.utg000126l.25 | TFIIH, POLYPEPTIDE 4 |
PMEG.utg000126l.26 | VALYL-TRNA SYNTHETASES |
PMEG.utg000126l.27 | |
PMEG.utg000126l.28 | DIMETHYLARGININE DIMETHYLAMINOHYDROLASE |
PMEG.utg000126l.29 | SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 |
PMEG.utg000126l.3 | XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED |
PMEG.utg000126l.30 | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 |
PMEG.utg000126l.31 | MEMBRANE PROTEIN CH1 RELATED |
PMEG.utg000126l.32 | |
PMEG.utg000126l.33 | - |
PMEG.utg000126l.34 | GLYCOSIDASE FAMILY 31 |
PMEG.utg000126l.35 | GLYCOSIDASE FAMILY 31 |
PMEG.utg000126l.36 | ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4 |
PMEG.utg000126l.37 | TUDOR DOMAIN CONTAINING PROTEIN |
PMEG.utg000126l.38 | |
PMEG.utg000126l.39 | SERYL-TRNA SYNTHETASE |
PMEG.utg000126l.4 | ADP-RIBOSYLGLYCOHYDROLASE |
PMEG.utg000126l.40 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
PMEG.utg000126l.41 | DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE |
PMEG.utg000126l.42 | PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED |
PMEG.utg000126l.43 | NETRIN/LAMININ-RELATED |
PMEG.utg000126l.44 | INTERFERON ALPHA-INDUCIBLE PROTEIN 27 |
PMEG.utg000126l.45 | INTERFERON ALPHA-INDUCIBLE PROTEIN 27 |
PMEG.utg000126l.46 | VESICLE-ASSOCIATED MEMBRANE PROTEIN 4 |
PMEG.utg000126l.47 | TRANSMEMBRANE CHANNEL-RELATED |
PMEG.utg000126l.48 | SI:CH211-175M2.5 |
PMEG.utg000126l.49 | DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE |
PMEG.utg000126l.5 | - |
PMEG.utg000126l.50 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3 |
PMEG.utg000126l.51 | 8-OXOGUANINE DNA GLYCOSYLASE |