About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26373-
Paelopatides26374NEUROPEPTIDE Y RECEPTOR
Paelopatides26375-
Paelopatides26376-
Paelopatides26377PROTEIN CBG26694
Paelopatides26378REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26379EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides26380ZGC:195170
Paelopatides26381SI:CH211-108C17.2-RELATED-RELATED
Paelopatides26382L-GULONOLACTONE OXIDASE
Paelopatides26383-
Paelopatides26384GOLGI-ASSOCIATED PROTEIN GCP360-RELATED
Paelopatides26385HOOK PROTEINS
Paelopatides26386PROTEIN CBG26694
Paelopatides26387-
Paelopatides26388-
Paelopatides26389-
Paelopatides26390-
Paelopatides26391ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26392RHO FAMILY GTPASE
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