About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26309ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26310-
Paelopatides26311-
Paelopatides26312-
Paelopatides26313DNA HELICASE RECQ FAMILY MEMBER
Paelopatides26314UNCHARACTERIZED
Paelopatides26315UNCHARACTERIZED
Paelopatides26316-
Paelopatides26317NETRIN RECEPTOR UNC5
Paelopatides26318NETRIN RECEPTOR UNC5
Paelopatides26319REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26320TRANSPOSABLE ELEMENT-RELATED
Paelopatides26321-
Paelopatides26322REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26323SPLICING FACTOR 3B SUBUNIT 4
Paelopatides26324-
Paelopatides26325SPLICING FACTOR 3B SUBUNIT 4
Paelopatides26326ATROPHIN-RELATED
Paelopatides26327-
Paelopatides26328MYELOID LEUKEMIA FACTOR
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