About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28824-
Paelopatides28825-
Paelopatides28826PROTEIN CBG26694
Paelopatides28827PROTEIN CBG26694
Paelopatides28828-
Paelopatides28829TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides28830-
Paelopatides28831-
Paelopatides28832-
Paelopatides28833TRANSPORTIN 3 AND IMPORTIN 13
Paelopatides28834-
Paelopatides28835FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides28836IRON-SULFUR PROTEIN NUBPL
Paelopatides28837ENDONUCLEASE-RELATED
Paelopatides28838MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25
Paelopatides28839ENDONUCLEASE-RELATED
Paelopatides28840TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides28841-
Paelopatides28842-
Paelopatides28843PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED
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