About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28844-
Paelopatides28845-
Paelopatides28846-
Paelopatides28847EXPRESSED PROTEIN
Paelopatides28848-
Paelopatides28849-
Paelopatides28850REVERSE TRANSCRIPTASES
Paelopatides28851CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Paelopatides28852CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides28853CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Paelopatides28854ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides28855HEAT SHOCK PROTEIN 70KDA
Paelopatides28856ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides28857DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides28858GAG-RELATED PROTEIN
Paelopatides28859AMP DEAMINASE
Paelopatides28860EPM2A-INTERACTING PROTEIN 1
Paelopatides28861PROTEIN CBG26694
Paelopatides28862ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides28863CLATHRIN HEAVY CHAIN RELATED
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