About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28804REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides28805PROTEIN CBG26694
Paelopatides28806F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides28807REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides28808TRANSPOSABLE ELEMENT-RELATED
Paelopatides28809-
Paelopatides28810ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides28811EPM2A-INTERACTING PROTEIN 1
Paelopatides28812PARANEOPLASTIC ANTIGEN
Paelopatides28813HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides28814ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides28815ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides28816TRANSPOSON
Paelopatides28817-
Paelopatides28818DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides28819-
Paelopatides28820UNCHARACTERIZED
Paelopatides28821ACETYL-COA C-ACYLTRANSFERASE
Paelopatides28822ATP-DEPENDENT RNA HELICASE
Paelopatides28823PROTEIN CBG12474
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