About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28763ANILLIN/RHOTEKIN RTKN
Paelopatides28764-
Paelopatides28765-
Paelopatides28766TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides28767-
Paelopatides28768-
Paelopatides28769-
Paelopatides28770S -2-HYDROXY-ACID OXIDASE-RELATED
Paelopatides28771ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE
Paelopatides28772-
Paelopatides28773PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4
Paelopatides28774ESOPHAGEAL CANCER ASSOCIATED PROTEIN
Paelopatides28775-
Paelopatides28776-
Paelopatides28777TENASCIN
Paelopatides28778PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Paelopatides28779(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
Paelopatides28781PITUITARY HOMEOBOX HOMOLOG PTX1
Paelopatides28782ENZYMATIC POLYPROTEIN-RELATED
Paelopatides28783TRANSPOSON TY3-I GAG-POL POLYPROTEIN
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