About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29092TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides29093QUINONE OXIDOREDUCTASE
Paelopatides29094C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED
Paelopatides29095CXXC-TYPE ZINC FINGER PROTEIN 1
Paelopatides29096PROTEIN CBG26694
Paelopatides29097-
Paelopatides29098HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides29099HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides29100-
Paelopatides29101FI04643P-RELATED
Paelopatides29102PROTEIN CBG26694
Paelopatides29103GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1
Paelopatides29104-
Paelopatides29105-
Paelopatides29106-
Paelopatides29107S-ANTIGEN PROTEIN
Paelopatides29108S-ANTIGEN PROTEIN
Paelopatides29109S-ANTIGEN PROTEIN
Paelopatides29110ENDONUCLEASE-RELATED
Paelopatides29111-
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