About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28990-
Paelopatides28991POL PROTEIN
Paelopatides28992-
Paelopatides28993-
Paelopatides28994-
Paelopatides28995-
Paelopatides28996-
Paelopatides28997ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides28998-
Paelopatides28999-
Paelopatides29000-
Paelopatides29001TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54
Paelopatides29002TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54
Paelopatides29003ENDONUCLEASE-RELATED
Paelopatides29004-
Paelopatides29005REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29006-
Paelopatides29007-
Paelopatides29008GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILY
Paelopatides29009GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILY
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