About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33192PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides33193HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides33194FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33195-
Paelopatides33196RNA HELICASE
Paelopatides33197ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Paelopatides33198FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33199-
Paelopatides33200ADRENOCORTICAL DYSPLASIA PROTEIN ACD
Paelopatides33201AMINO ACID TRANSPORTER
Paelopatides33202PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides33203AMINO ACID TRANSPORTER
Paelopatides33204-
Paelopatides33205-
Paelopatides33206MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides33207TRNA-DIHYDROURIDINE SYNTHASE
Paelopatides33208-
Paelopatides33209RETROTRANSPOSON
Paelopatides33210-
Paelopatides33211RETROTRANSPOSON
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