About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36134-
Paelopatides36135-
Paelopatides36136E3 UBIQUITIN-PROTEIN LIGASE TRIM
Paelopatides36137-
Paelopatides36138ANTIGEN BSP, PUTATIVE-RELATED
Paelopatides36139ELL-ASSOCIATED FACTOR EAF
Paelopatides36140CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P
Paelopatides36141B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides36142ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36144-
Paelopatides36145ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides36146N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides36147CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides36148CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides36149FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36150PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE
Paelopatides36151REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36152-
Paelopatides36153-
Paelopatides36155ALPHA- 1,3 -FUCOSYLTRANSFERASE
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