About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36032COILED-COIL ALPHA-HELICAL ROD PROTEIN 1
Paelopatides36033PROTEIN CBG26694
Paelopatides36034COILED-COIL ALPHA-HELICAL ROD PROTEIN 1
Paelopatides36035-
Paelopatides36036-
Paelopatides36037POTASSIUM/PROTON ANTIPORTER-RELATED
Paelopatides36038-
Paelopatides36039-
Paelopatides36040ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER
Paelopatides36041REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36042ENDONUCLEASE
Paelopatides36043ENDONUCLEASE
Paelopatides36044RHO GUANINE EXCHANGE FACTOR-RELATED
Paelopatides36045APG9 AUTOPHAGY 9
Paelopatides36046-
Paelopatides36047HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides36048FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36049FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36050FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36051TRANSPOSABLE ELEMENT-RELATED
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