About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36176-
Paelopatides36177PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides36178REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36179BONUS, ISOFORM C-RELATED
Paelopatides36180BONUS, ISOFORM C-RELATED
Paelopatides36181EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
Paelopatides36182-
Paelopatides36183-
Paelopatides36184-
Paelopatides36185MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
Paelopatides36186NEPHROCYSTIN-4
Paelopatides36188F-BOX ONLY PROTEIN 4
Paelopatides36189REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36190PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides36191PROTEIN ATP6V1FNB-LIKE
Paelopatides36192NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2
Paelopatides36193-
Paelopatides36194DEOXYRIBONUCLEASE
Paelopatides36195METHIONYL-TRNA FORMYLTRANSFERASE
Paelopatides36196MOLYBDOPTERIN COFACTOR SULFURASE MOSC
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