About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36092GH10160P
Paelopatides36093REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36094UNCHARACTERIZED
Paelopatides36095-
Paelopatides36096UNCHARACTERIZED
Paelopatides36097-
Paelopatides36098REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36099TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides36100SAM DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides36101-
Paelopatides36102N-MYC DOWNSTREAM REGULATED
Paelopatides36103N-MYC DOWNSTREAM REGULATED
Paelopatides36104-
Paelopatides36105PROTEIN CBG26694
Paelopatides36106PROTEIN CBG26694
Paelopatides36107SLD5 PROTEIN
Paelopatides36108ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36109ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36110SLD5 PROTEIN
Paelopatides36111-
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