About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36282INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides36283PROTEIN CBG26694
Paelopatides36284INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides36285-
Paelopatides36286RIBONUCLEASE
Paelopatides36287FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36288PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides36289RETINAL PROTEIN 4
Paelopatides36290RAB GDP/GTP EXCHANGE FACTOR
Paelopatides36291-
Paelopatides36292LYR MOTIF-CONTAINING PROTEIN 9
Paelopatides36293CELL CYCLE CONTROL PROTEIN 50
Paelopatides36294-
Paelopatides36295SARCOSINE DEHYDROGENASE-RELATED
Paelopatides36296ATP-DEPENDENT RNA HELICASE
Paelopatides36297SJOEGREN SYNDROME NUCLEAR AUTOANTIGEN 1
Paelopatides36298-
Paelopatides36299-
Paelopatides36300RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Paelopatides36301-
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