About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36342TRANSMEMBRANE PROTEIN 243
Paelopatides36343-
Paelopatides36344PHD FINGER PROTEINS
Paelopatides36345SAM (S-ADENOSYL METHIONINE) TRANSPORTER
Paelopatides36346ZINC FINGER PROTEIN
Paelopatides36347ZINC FINGER PROTEIN
Paelopatides36348EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN
Paelopatides36349PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides36350UNCHARACTERIZED
Paelopatides36351REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36352UNCHARACTERIZED
Paelopatides36353-
Paelopatides36354CHIMERIN FAMILY MEMBER
Paelopatides36355-
Paelopatides36356-
Paelopatides36357PLASMINOGEN RECEPTOR (KT)
Paelopatides36358KRAB DOMAIN C2H2 ZINC FINGER
Paelopatides36359NEURABIN
Paelopatides36360NEURABIN
Paelopatides36361L1 TRANSPOSABLE ELEMENT-RELATED
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