About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40647-
Paelopatides40648CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides40649AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Paelopatides40650-
Paelopatides40651-
Paelopatides40652ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides40653ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides40654ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides40655-
Paelopatides40656REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides40657G DOMAIN-CONTAINING PROTEIN
Paelopatides40658-
Paelopatides40660REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides40661BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Paelopatides40662SI:CH211-196P9.1-RELATED
Paelopatides40663-
Paelopatides40664-
Paelopatides40665-
Paelopatides40666ATR-INTERACTING PROTEIN
Paelopatides40667-
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