About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40587-
Paelopatides40588SHC (SRC HOMOLOGY DOMAIN C-TERMINAL) ADAPTOR HOMOLOG
Paelopatides40589-
Paelopatides40590ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides40591B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides40592-
Paelopatides40593-
Paelopatides40594PROTEIN CBG26694
Paelopatides40595EPM2A-INTERACTING PROTEIN 1
Paelopatides40596MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides40597MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides40598THAP DOMAIN PROTEIN
Paelopatides40599-
Paelopatides40600CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides40601CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides40602-
Paelopatides40603IP13529P
Paelopatides40604TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides40605GLUCOSYLCERAMIDASE
Paelopatides40606SODIUM/CHLORIDE DEPENDENT TRANSPORTER
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