About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40544EPM2A-INTERACTING PROTEIN 1
Paelopatides40545EPM2A-INTERACTING PROTEIN 1
Paelopatides40546-
Paelopatides40547-
Paelopatides40548CWF19, CELL CYCLE CONTROL PROTEIN
Paelopatides40549ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides40550RETROTRANSPOSON
Paelopatides40551-
Paelopatides40552SPLICING FACTOR 3A SUBUNIT 2
Paelopatides40553NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
Paelopatides40554-
Paelopatides40555VASCULAR CELL ADHESION MOLECULE 1
Paelopatides40556REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides40560F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides40561-
Paelopatides40562WD40 REPEAT PROTEIN
Paelopatides40563ZYX102 PROTEIN
Paelopatides40564-
Paelopatides40565EXOCYST COMPLEX COMPONENT 8
Paelopatides40566-
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