About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40524-
Paelopatides40525-
Paelopatides40526TORSIN
Paelopatides40527TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBER
Paelopatides40528-
Paelopatides40529OTU DOMAIN CONTAINING PROTEIN
Paelopatides40530OTU DOMAIN CONTAINING PROTEIN
Paelopatides40531RAS-LIKE FAMILY MEMBER 11
Paelopatides40532HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides40533-
Paelopatides40534ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides40535-
Paelopatides40536-
Paelopatides40537-
Paelopatides40538AP ENDONUCLEASE
Paelopatides40539-
Paelopatides40540SLR5058 PROTEIN
Paelopatides40541-
Paelopatides40542UNCHARACTERIZED
Paelopatides40543EPM2A-INTERACTING PROTEIN 1
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