About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

<< First 1897 1898 1899 1900 1901 1902 1903 1904 1905 1906 Forward> Last>>        2877 pages in total

Gene IDDescription
Paelopatides40774CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides40775SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides40776VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 62-RELATED
Paelopatides40777SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides40778-
Paelopatides40779-
Paelopatides40780GCIP-INTERACTING PROTEIN P29
Paelopatides40781CELL DIVISION CYCLE 5-LIKE PROTEIN
Paelopatides40782CELL DIVISION CYCLE 5-LIKE PROTEIN
Paelopatides40783NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides40784-
Paelopatides40785PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
Paelopatides40786PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
Paelopatides40787ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides40788ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED
Paelopatides40789ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED
Paelopatides40790LEISHMANOLYSIN-LIKE PEPTIDASE
Paelopatides40791ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides40792-
Paelopatides40793REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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