About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40817G PATCH DOMAIN CONTAINING PROTEIN
Paelopatides40818SI:CH73-314G15.3
Paelopatides40819FERREDOXIN-RELATED
Paelopatides40820METAXIN RELATED
Paelopatides40821-
Paelopatides40822RETROTRANSPOSON
Paelopatides40823DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides40824SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides40825SULFOTRANSFERASE SULT
Paelopatides40826EXPRESSED PROTEIN
Paelopatides40827ACYL-COA DESATURASE
Paelopatides40828-
Paelopatides40829SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7
Paelopatides40830BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Paelopatides40831-
Paelopatides40832-
Paelopatides40833BONUS, ISOFORM C-RELATED
Paelopatides40834-
Paelopatides40835-
Paelopatides40836FIBRILLIN-RELATED
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