About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40794MACROGLOBULIN / COMPLEMENT
Paelopatides40795REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides40796DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides40797-
Paelopatides40798LITHOSTATHINE
Paelopatides40799ACYL-COA SYNTHETASE
Paelopatides40800SH2-SH3 ADAPTOR PROTEIN-RELATED
Paelopatides40801LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides40802SMC5-SMC6 COMPLEX LOCALIZATION FACTOR PROTEIN 1
Paelopatides40803-
Paelopatides40804PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides40805-
Paelopatides40806-
Paelopatides40807-
Paelopatides40808GLYPICAN
Paelopatides40809RAS-RELATED GTP BINDING RAG/GTR YEAST
Paelopatides40810REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides40814-
Paelopatides40815HEAT SHOCK PROTEIN 70KDA
Paelopatides40816HEAT SHOCK PROTEIN 70KDA
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