About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40837-
Paelopatides40839-
Paelopatides40840AGAP005574-PA
Paelopatides40841-
Paelopatides40842F-BOX/WD REPEAT-CONTAINING PROTEIN 2
Paelopatides40843CELL DEATH REGULATOR AVEN
Paelopatides40844-
Paelopatides40845-
Paelopatides40846COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides40847-
Paelopatides40848EPM2A-INTERACTING PROTEIN 1
Paelopatides40849HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides40850-
Paelopatides40851CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides408522-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL
Paelopatides40853-
Paelopatides40854SELENOPROTEIN W
Paelopatides40855CYSTATIN
Paelopatides40856RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED
Paelopatides40857CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 61
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