About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40858CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 61
Paelopatides40859N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides40860-
Paelopatides40861-
Paelopatides40863PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
Paelopatides40864-
Paelopatides40866NUCLEAR RECEPTOR SUBFAMILY 0 GROUP B
Paelopatides40867MITOCHONDRIAL DIVISION PROTEIN 1-RELATED
Paelopatides40868PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides40869PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides40870WD REPEAT DOMAIN-CONTAINING FAMILY
Paelopatides40871-
Paelopatides40872-
Paelopatides40873PROSTAGLANDIN REDUCTASE
Paelopatides40874-
Paelopatides40875-
Paelopatides40876APICAL PROTEIN/SHROOM-RELATED
Paelopatides40877-
Paelopatides40878DEOXYCYTIDYLATE DEAMINASE-RELATED
Paelopatides40879DEOXYCYTIDYLATE DEAMINASE-RELATED
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