About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41743CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides41744-
Paelopatides41745PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides41746RETROTRANSPOSON
Paelopatides41747GUANYLYL CYCLASE
Paelopatides41748-
Paelopatides41749-
Paelopatides41750DUAL SPECIFICITY PROTEIN KINASE
Paelopatides41751EPM2A-INTERACTING PROTEIN 1
Paelopatides41752-
Paelopatides41753-
Paelopatides41755PROTEIN CBG26694
Paelopatides41756PROTEIN CBG26694
Paelopatides41757-
Paelopatides41758PROTEIN CBG26694
Paelopatides41759PROTEIN CBG26694
Paelopatides41760PROTEIN CBG26694
Paelopatides41761PROTEIN CBG26694
Paelopatides41762PROTEIN CBG26694
Paelopatides41763RETROTRANSPOSON GAG-LIKE PROTEIN 9
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