About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41640PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides41641-
Paelopatides41642-
Paelopatides41643LP06937P
Paelopatides41644TITIN
Paelopatides41645-
Paelopatides41646GLUTATHIONYL-HYDROQUINONE REDUCTASE
Paelopatides41647DIGEORGE SYNDROME CRITICAL REGION 6 DGCR6 FAMILY MEMBER
Paelopatides41648IMPORTIN ALPHA
Paelopatides41649PROTEIN CBG26694
Paelopatides41650-
Paelopatides41651-
Paelopatides41652-
Paelopatides41653SERINE/THREONINE PROTEIN KINASE
Paelopatides41654-
Paelopatides41655NETRIN/LAMININ-RELATED
Paelopatides41656P53 INDUCED PROTEIN
Paelopatides41657CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides41658TRANSPOSABLE ELEMENT-RELATED
Paelopatides41659-
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