About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41784SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG
Paelopatides41785SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG
Paelopatides41786RHO GTPASE-ACTIVATING PROTEIN 100F
Paelopatides41787BUCENTAUR RELATED
Paelopatides41788-
Paelopatides41789POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides41790BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER
Paelopatides41791POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides41792-
Paelopatides41793POTASSIUM CHANNEL, SUBFAMILY K
Paelopatides41794CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides41795-
Paelopatides41796UNCHARACTERIZED
Paelopatides41797FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides41798FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides41799REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41800-
Paelopatides41801BUCENTAUR RELATED
Paelopatides41802REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41803ZINC FINGER PROTEIN
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