About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41764RETROTRANSPOSON GAG-LIKE PROTEIN 9
Paelopatides41765SH3 ADAPTER PROTEIN SPIN90 NCK INTERACTING PROTEIN WITH SH3 DOMAIN
Paelopatides41766DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 3
Paelopatides41767SOLUTE CARRIER FAMILY 35
Paelopatides41768-
Paelopatides41769-
Paelopatides41770-
Paelopatides41771-
Paelopatides41772-
Paelopatides41773-
Paelopatides41774RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides41775GTP-BINDING
Paelopatides41776NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides41777-
Paelopatides41778EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
Paelopatides41779EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
Paelopatides41780-
Paelopatides41781-
Paelopatides41782-
Paelopatides41783PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
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