About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43485-
Paelopatides43486-
Paelopatides43487ZINC FINGER PROTEIN 200
Paelopatides43488-
Paelopatides43492-
Paelopatides43493GTP-BINDING
Paelopatides43494-
Paelopatides43495MATING RESPONSE PROTEIN POI2
Paelopatides43496ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides43497CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 65
Paelopatides43498REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43499CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 65
Paelopatides43500-
Paelopatides43502-
Paelopatides43503-
Paelopatides43504TGF-BETA INDUCED APOPTOSIS PROTEIN
Paelopatides43505LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN
Paelopatides43506ARMADILLO REPEAT-CONTAINING PROTEIN 8
Paelopatides43507SUGAR-1-PHOSPHATE GUANYL TRANSFERASE
Paelopatides43508VILLIN
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