About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43465REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43466-
Paelopatides43467PYRUVATE DEHYDROGENASE KINASE
Paelopatides43468-
Paelopatides43469TETRATRICOPEPTIDE REPEAT PROTEIN 5
Paelopatides43470UNCHARACTERIZED
Paelopatides43471DYNEIN LIGHT CHAIN ROADBLOCK
Paelopatides43472DYNEIN LIGHT CHAIN ROADBLOCK
Paelopatides43473CYTOCHROME P450 FAMILY 3
Paelopatides43474-
Paelopatides43475-
Paelopatides43476-
Paelopatides43477ZINC FINGER PROTEIN
Paelopatides43478-
Paelopatides43479ALANINE AMINOTRANSFERASE
Paelopatides43480TRANSMEMBRANE PROTEIN 143 FAMILY MEMBER
Paelopatides43481TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5
Paelopatides43482TYROSINE-PROTEIN KINASE
Paelopatides43483TGF-BETA FAMILY
Paelopatides43484MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
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