About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43445PROTEIN CBG26694
Paelopatides43446-
Paelopatides43447FAM11A, B PROTEIN
Paelopatides43448NITRIC OXIDE SYNTHASE-RELATED
Paelopatides43449-
Paelopatides43450CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides43451-
Paelopatides43452-
Paelopatides43453-
Paelopatides43454-
Paelopatides43455INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Paelopatides43456-
Paelopatides43457SI:CH211-262H13.3-RELATED-RELATED
Paelopatides43458-
Paelopatides43459HMG DOMAIN-CONTAINING PROTEIN 3
Paelopatides43460PROTEASE M1 ZINC METALLOPROTEASE
Paelopatides43461PROTEIN CBG26694
Paelopatides43462PROTEIN CBG26694
Paelopatides43463ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides43464REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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