About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05941-
Paelopatides05942DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides05943CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides05944TYROSINE-PROTEIN KINASE
Paelopatides05945TYROSINE-PROTEIN KINASE
Paelopatides05946-
Paelopatides05947AGAP008221-PA
Paelopatides05948FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides05949BETA-GALACTOSIDASE RELATED
Paelopatides05950PROTEIN CBG26694
Paelopatides05951ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides05952EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides05953-
Paelopatides05954G DOMAIN-CONTAINING PROTEIN
Paelopatides05955G DOMAIN-CONTAINING PROTEIN
Paelopatides05956REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05957ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides05958EPM2A-INTERACTING PROTEIN 1
Paelopatides05959PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides05960PHD-TYPE DOMAIN-CONTAINING PROTEIN
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