About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05983BUCENTAUR RELATED
Paelopatides05984SUSHI DOMAIN-CONTAINING PROTEIN 1
Paelopatides05985CARBONIC ANHYDRASE
Paelopatides05986PROTEIN CBG26694
Paelopatides05987GTP-BINDING
Paelopatides05988EPM2A-INTERACTING PROTEIN 1
Paelopatides05989HEDGEHOG
Paelopatides05990PARANEOPLASTIC ANTIGEN
Paelopatides05991-
Paelopatides05992-
Paelopatides05993-
Paelopatides05994G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
Paelopatides05995-
Paelopatides05996ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides05998-
Paelopatides05999-
Paelopatides06000-
Paelopatides06001ENZYMATIC POLYPROTEIN-RELATED
Paelopatides06002TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides06003MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
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