About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07091REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07092HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07093TRANSPOSON
Paelopatides07094PROTEIN CBG26694
Paelopatides07095PROTEIN, PUTATIVE-RELATED
Paelopatides07096-
Paelopatides07097-
Paelopatides07098L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides07099-
Paelopatides07100-
Paelopatides07101-
Paelopatides07102PATCHED-RELATED
Paelopatides07103STEROID RECEPTOR RNA ACTIVATOR 1
Paelopatides07104-
Paelopatides07105MICROSOMAL GLUTATHIONE S-TRANSFERASE 1
Paelopatides07106-
Paelopatides07107PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides07108-
Paelopatides07109PROTEIN CBG26694
Paelopatides07110PROTEIN CBG26694
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