About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07154-
Paelopatides07155-
Paelopatides07162REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07163-
Paelopatides07164REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07165ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides07166MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L51
Paelopatides07167-
Paelopatides07168-
Paelopatides07169-
Paelopatides07170SLR5058 PROTEIN
Paelopatides07173-
Paelopatides07174ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides07175PROTEIN CBG26694
Paelopatides07176TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides07177-
Paelopatides07178REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07179L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides07182-
Paelopatides07183REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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